Browse of TCMCG008C04234 protein

CDS

Accession Number	TCMCG008C04234
gbkey	CDS
Protein Id	XP_020222085.1
Location	join(30378994..30379845,30380905..30381093,30381968..30382132,30382713..30382811,30382934..30383182,30384026..30384262,30384358..30384489,30385601..30385861,30385940..30386011,30386437..30386586,30386888..30387352,30387658..30387950,30388553..30388592,30388715..30388735)
Gene	LOC109804654
GeneID	109804654
Organism	Cajanus cajan

Protein

Length	1074aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA376605
db_source	XM_020366496.2
Definition	DNA mismatch repair protein MSH3 isoform X1 [Cajanus cajan]

EGGNOG-MAPPER Annotation

COG_category	L
Description	DNA mismatch repair
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K08736        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko01524        [VIEW IN KEGG] ko03430        [VIEW IN KEGG] ko05200        [VIEW IN KEGG] ko05210        [VIEW IN KEGG] map01524        [VIEW IN KEGG] map03430        [VIEW IN KEGG] map05200        [VIEW IN KEGG] map05210        [VIEW IN KEGG]
GOs	GO:0000217        [VIEW IN EMBL-EBI] GO:0000404        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003677        [VIEW IN EMBL-EBI] GO:0003684        [VIEW IN EMBL-EBI] GO:0003690        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006298        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0008094        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016462        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016817        [VIEW IN EMBL-EBI] GO:0016818        [VIEW IN EMBL-EBI] GO:0016887        [VIEW IN EMBL-EBI] GO:0017111        [VIEW IN EMBL-EBI] GO:0030983        [VIEW IN EMBL-EBI] GO:0032135        [VIEW IN EMBL-EBI] GO:0032300        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0042623        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043570        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGGAAAGCAAAAGCAACAAGTGATTTCCCGCTTCTTCGCTCCGAAACCCAAAACTCCTCCATCAGCCACTTCCCAAACACCTCCTCCTACTCCCACTCCCAAAATCTCAGCCACCGTCGCTTTCTCCCCTTCCAAACGCCGCCTCACTTCCCATCTCACACCCCCTCGCAAACACCAGAAGCTTCTCGAACCTTCCACGTCCTCTCAGCCACAACCTTCTTCTTCTTCTTCCAAGCCCCCAAACTACACTCCCTTGGAACAACAGGTCCTAAACCTCAAGGCCAAACACCCCGATGTCCTCCTCATGGTCGAAGTCGGTTACAAGTACCGTTTCTTCGGCCAAGACGCGGAACACGCCGCCAGAGTTCTCGGCATTTACGCCCACGTGGACCACAACTTCTTAACCGCGAGCATACCAACTTTTCGACTCAATGTCCACGTCAGAAGGCTCGTCAGCGCGGGCTACAAGGTCGGCGTCGTCAAGCAGACCGAGACCGCCGCCATCAAGGCCCAAAGTTCCAACCGTTTGGGCCCATTCTGCCGTGGGCTTTCGGCCCTCTACACCAAGGCCACGCTAGAGGCGGCGCCGGATTTGGGGGGACCCGAGGACGGGTGCGGGGGAGAAAGCAACTACTTGATGTGTGTGGTGGAGAAGAGTGTTTTGGGTGAGAAGGGAAATTGTGGGGTTAATGTCAGGCTTGGGTTTGTTGCTGTGGAGATTTCCACCGGGGATGTTGTTTATGCGGAGTTTGGTGATGATTTTCTGAGGGGTGCGCTTGAGGCTGCTCTTCTGAGCTTGTCTCCGGCTGAGTTGCTTCTTGGGGACCCTCTTTCGAAGCAAACAGACAAGTTATTGTTGAATTTTGCTGGACCTGCCTCAAATGTTCGAGTAGAGCGTGTTTCACGAGATTGCTTCACTGGGGGGGGTGCTCTTGCTGAAGTTATGACCCTGTACGAGAACATGCATGTAGAAGGTTCATCAGATTCAATACAAAGCAATGATTTGGCTGAGAACAGAAGTCAGCAGTTAGTAATCAAGGAGGTGATGAACATGCCAGATTTGGCTGTCCAAGCTTTGGCCTTAACTATTCGCCATTTGAAGGAATTTGGTTTTGAAAGAATTCTGTGTTCAGGAGCTTCTTTAAGGCCCTTCTCAAGCAAAACGGAAATGACTCTCTCAGCCAATGCACTTCAACAACTGGAGGTTTTGAAAAATAATAGTGATGGATCTGAGACCGGTTCCTTGCTGCAAATTATGAATCGAACTCTTACTATATTTGGTTCCAGGCTTCTTAGGCATTGGGTATCTCATCCTCTGTGTGATCAAACCTTAATTTCTGCTCGTCTTCATGCTGTAACTGAAATTGCAGAGTCCATGGGATCTTGTAATAGTGTGAAGAATCTTGGACATGTTGAGGAAGATCCTGATGTAGCAATTGTGCAACCTGAGTTAGCATACATACTTTCACTGGTTTTGACAACTCTTGGCCGAGCACCTGATATACAACGTGGAATTACAAGAATTTTCCATTGCACTGCTACCCCATCTGAGTTCGTTGCAGTAATTCAAGCTATTTTGTCTGCTGGAAAACAGCTTCAACAACTTAACATAGGAGATGGGAATAATAATACATTGCACTCTAATCTGTTAAAAAAGTTAATTTTGACTGCTTCCTCTGGCATTGTTATTGACAATGCTGCAAAATTGTTGTCATCTTTAAATAAAGACGTTGCTGATCAAGGAGATCTAACAAAATTAATCATTGCATCAGAGGGACAATTCCCAGAGATCATTAGAGCTCGGAAGGCTTTCAAGCTGGCGGTGGAACACTTAGATTCATTGATTGACTTGTATCGCAAACGGTTTGGAATGCAAAATTTGGAATTCATGAGTATTTCTGGAACAACTCATTTGATTGAGTTATCAACTAATGTAAAGGTTCCTTCAAACTGGGTCAAGGTAAATAGCACAAAGAAAACAATTCGATATCACCCTCCTGAAGTAGTGTCAGCATTGGACAAGTTATCATTAGCAAAAGAAGAACTCACTGTTGCCTGCCAAGCAGCTTGGAATAGCTTTCTTAGGGACTTCAGTAAACACTATGCTGATTTCCAAGCTTCTGTTCAAGCACTAGCTGCTTTAGATTGTCTACATTCACTTGCCATTCTTTCAAGAAATAAGGGTTATGTTCGGCCAGTGTTTGTAGATGATCATGAGCCTGTTCAGATACAAATTTGTTCTGGTAGACATCCGGTTTTGGAGACTACCTTACAAGATAATTTTGTTCCAAATGATACAAACATGCATGCAGATGGAGAGTACTGTCAGATTGTTACTGGACCCAATATGGGGGGAAAAAGTTGCTATGTTCGCCAGGTGGCTCTGATTGCTATAATGGCTCAGGTTGGTTCCTTTGTACCAGCATCATCAGCAAAACTGCATGTCCTGGATGGAATCTACACTCGGATGGGTGCTTCTGACAGTATTCAGCAAGGGAGAAGCACCTTCCTAGAAGAACTAAGTGAGACTTCACATATACTACATAGTTGCACAGAACATTCACTGGTTATCATTGATGAGCTTGGGAGAGGTACAAGTACACATGATGGTATGGCCATTGCTCATGCAACATTGCATTATCTTCTGAAGCAAAAAAGAAGCATGGTCCTCTTCGTCACTCACTATCCAAAGATTGCCAACCTGGCTGCTGAATTTCCTGGCTCTGTGGCAGCATATCACGTATCACATCTGACCTCACGTGATGCAAGTAAAAATTCCAACTTGGATCATGATGTCACTTACCTCTACAAGCTCGTGCCTGGTGTTTCAGAGAGGAGTTTTGGCTTTAAGGTTGCTCAACTAGCACAGTTACCATCACATTGCATCAGTCGAGCCATGGTCATGGCTTCCAAATTAGAAGCACTAGTAAACAATAGAATACATAGTAGATCAAGAAAGGAACTACTATTGGATATGCTGGTGATTGGTCAAGAGCAAGAACAGCTTATGGCTCAACCATATGATCGTCCACATCAAGAGTTTGGTATGGCTTACAAAGATTTCTATTTAAACTTAAAAGCTGCTCTACAAGATGATGACTGTGCAAAAAACTTTCACCTTTTGGAGCATGCTAGAAGCATTGCAAGGAAATTAATTGGCAGGATGTCCGTCCTTTTTGAGCCTACGGAAGTAAAAGCAAAGTGCGGCATATGGTTGTCCTGA

Protein:   MGKQKQQVISRFFAPKPKTPPSATSQTPPPTPTPKISATVAFSPSKRRLTSHLTPPRKHQKLLEPSTSSQPQPSSSSSKPPNYTPLEQQVLNLKAKHPDVLLMVEVGYKYRFFGQDAEHAARVLGIYAHVDHNFLTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAQSSNRLGPFCRGLSALYTKATLEAAPDLGGPEDGCGGESNYLMCVVEKSVLGEKGNCGVNVRLGFVAVEISTGDVVYAEFGDDFLRGALEAALLSLSPAELLLGDPLSKQTDKLLLNFAGPASNVRVERVSRDCFTGGGALAEVMTLYENMHVEGSSDSIQSNDLAENRSQQLVIKEVMNMPDLAVQALALTIRHLKEFGFERILCSGASLRPFSSKTEMTLSANALQQLEVLKNNSDGSETGSLLQIMNRTLTIFGSRLLRHWVSHPLCDQTLISARLHAVTEIAESMGSCNSVKNLGHVEEDPDVAIVQPELAYILSLVLTTLGRAPDIQRGITRIFHCTATPSEFVAVIQAILSAGKQLQQLNIGDGNNNTLHSNLLKKLILTASSGIVIDNAAKLLSSLNKDVADQGDLTKLIIASEGQFPEIIRARKAFKLAVEHLDSLIDLYRKRFGMQNLEFMSISGTTHLIELSTNVKVPSNWVKVNSTKKTIRYHPPEVVSALDKLSLAKEELTVACQAAWNSFLRDFSKHYADFQASVQALAALDCLHSLAILSRNKGYVRPVFVDDHEPVQIQICSGRHPVLETTLQDNFVPNDTNMHADGEYCQIVTGPNMGGKSCYVRQVALIAIMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILHSCTEHSLVIIDELGRGTSTHDGMAIAHATLHYLLKQKRSMVLFVTHYPKIANLAAEFPGSVAAYHVSHLTSRDASKNSNLDHDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAMVMASKLEALVNNRIHSRSRKELLLDMLVIGQEQEQLMAQPYDRPHQEFGMAYKDFYLNLKAALQDDDCAKNFHLLEHARSIARKLIGRMSVLFEPTEVKAKCGIWLS